Season 3 consists of 13 episodes, and continues from the second season finale, where most of the main characters ended up in Panama. While Lincoln Burrows is exonerated from his alleged crimes, Michael Scofield is imprisoned at Sona Federal Prison facing a homicide charge. Alexander Mahone, Theodore Bagwell, and Brad Bellick have also been incarcerated at Sona for various crimes in Panama. Michael and Lincoln are coerced by The Company into helping fellow convict James Whistler escape in exchange for the release of Sara and LJ. After a few failed attempts, Michael finally manages to break Whistler out of Sona, along with Mahone and friend, Luis Gallego. Though Lechero, Bagwell, and Bellick were in on the escape, they didn't make it out. The season ends with LJ being traded for Whistler, Sucre being thrown in Sona, and Michael wanting to get revenge of Sara's death.